Title
Binary acronym disambiguation in clinical notes from electronic health records with an application in computational phenotyping
Abstract
•Acronym disambiguation – identifying the meaning of an acronym – is important for information retrieval in clinical EHR systems.•Most acronym disambiguation methods rely on manual annotation.•We propose a novel unsupervised method, CASEml, that uses the surrounding words as well as visit information to disambiguate acronyms.•CASEml performs as good or better than a state-of-the-art knowledge-based methods.•We demonstrate the utility of CASEml for downstream NLP tasks using clinical EHR text.
Year
DOI
Venue
2022
10.1016/j.ijmedinf.2022.104753
International Journal of Medical Informatics
Keywords
DocType
Volume
Acronym disambiguation,Electronic health records,Natural language processing,Predictive modeling,Semantic embedding,Unsupervised learning
Journal
162
ISSN
Citations 
PageRank 
1386-5056
0
0.34
References 
Authors
0
10
Name
Order
Citations
PageRank
Nicholas B Link100.34
Sicong Huang200.34
Tianrun Cai343.45
Jiehuan Sun401.35
Kumar Dahal500.34
Lauren Costa601.01
Kelly Cho700.34
Katherine Liao800.34
Tianxi Cai94312.28
Chuan Hong1012.04