Haplotype-aware variant selection for genome graphs | 0 | 0.34 | 2022 |
Real-Time Mapping Of Nanopore Raw Signals | 1 | 0.34 | 2021 |
Efficient Parallel Sparse Symmetric Tucker Decomposition for High-Order Tensors. | 1 | 0.36 | 2021 |
GLAD: Learning Sparse Graph Recovery | 1 | 0.35 | 2020 |
Interval stabbing on the Automata Processor | 0 | 0.34 | 2020 |
On the Complexity of Sequence-to-Graph Alignment | 0 | 0.34 | 2020 |
Distributed enhanced suffix arrays: efficient algorithms for construction and querying | 0 | 0.34 | 2019 |
ParRefCom - Parallel Reference-based Compression of Paired-end Genomics Read Datasets. | 0 | 0.34 | 2019 |
On the Complexity of Sequence to Graph Alignment. | 1 | 0.35 | 2019 |
Faster Computation of Genome Mappability. | 0 | 0.34 | 2018 |
Faster Computation of Genome Mappability with one Mismatch | 0 | 0.34 | 2018 |
An SVM-based method for assessment of transcription factor-DNA complex models. | 0 | 0.34 | 2018 |
Performance extraction and suitability analysis of multi- and many-core architectures for next generation sequencing secondary analysis | 2 | 0.39 | 2018 |
An Alignment-free Heuristic for Fast Sequence Comparisons with Applications to Phylogeny Reconstruction. | 0 | 0.34 | 2018 |
Optimizing high performance distributed memory parallel hash tables for DNA k-mer counting. | 3 | 0.40 | 2018 |
Parallel Exact Dynamic Bayesian Network Structure Learning with Application to Gene Networks | 0 | 0.34 | 2017 |
Introduction to HiCOMB Workshop | 0 | 0.34 | 2017 |
Parallel Construction of Suffix Trees and the All-Nearest-Smaller-Values Problem | 0 | 0.34 | 2017 |
Confidence assessment of protein-DNA complex models | 0 | 0.34 | 2017 |
Distributed Memory Partitioning of High-Throughput Sequencing Datasets for Enabling Parallel Genomics Analyses | 0 | 0.34 | 2017 |
Probabilistic estimation of overlap graphs for large sequence datasets | 0 | 0.34 | 2017 |
An Adaptive Parallel Algorithm for Computing Connected Components. | 4 | 0.38 | 2017 |
Reverse Engineering Gene Networks: A Comparative Study at Genome-scale | 0 | 0.34 | 2017 |
Reprint of "A parallel connectivity algorithm for de Bruijn graphs in metagenomic applications". | 0 | 0.34 | 2017 |
Effective Utilization of Paired Reads to Improve Length and Accuracy of Contigs in Genome Assembly. | 0 | 0.34 | 2016 |
HiCOMB Introduction and Committees | 0 | 0.34 | 2016 |
SNVSniffer: an integrated caller for germline and somatic single-nucleotide and indel mutations. | 0 | 0.34 | 2016 |
CHIUW Introduction and Committees. | 0 | 0.34 | 2016 |
An Efficient Algorithm for Finding All Pairs k-Mismatch Maximal Common Substrings. | 1 | 0.36 | 2016 |
Parallel Interval Stabbing on the Automata Processor. | 0 | 0.34 | 2016 |
Kmerind: A Flexible Parallel Library for K-mer Indexing of Biological Sequences on Distributed Memory Systems. | 2 | 0.40 | 2016 |
A Memory and Time Scalable Parallelization of the Reptile Error-Correction Code | 1 | 0.35 | 2016 |
Parallel machine learning approaches for reverse engineering genome-scale networks | 0 | 0.34 | 2015 |
Efficient Alignment Free Sequence Comparison With Bounded Mismatches | 9 | 0.61 | 2015 |
Big data in life sciences and public health. | 0 | 0.34 | 2015 |
A parallel connectivity algorithm for de Bruijn graphs in metagenomic applications | 16 | 2.20 | 2015 |
Parallel framework for dimensionality reduction of large-scale datasets | 2 | 0.40 | 2015 |
Parallel Mutual Information Based Construction of Genome-Scale Networks on the Intel®Xeon Phi™ Coprocessor | 5 | 0.46 | 2015 |
Editorial: Scalable Systems for Big Data Management and Analytics. | 1 | 0.36 | 2015 |
Information Theory Based Genome-Scale Gene Networks Construction Using MapReduce. | 0 | 0.34 | 2015 |
HiCOMB Introduction and Committees | 0 | 0.34 | 2015 |
SNVSniffer: An integrated caller for germline and somatic SNVs based on Bayesian models | 0 | 0.34 | 2015 |
Dtree: Dynamic Task Scheduling At Petascale | 1 | 0.36 | 2015 |
Parallel distributed memory construction of suffix and longest common prefix arrays | 9 | 0.49 | 2015 |
A Review of Hardware Acceleration for Computational Genomics | 25 | 1.03 | 2014 |
All-pairs computations on many-core graphics processors | 8 | 0.49 | 2013 |
HiCOMB Introduction | 0 | 0.34 | 2013 |
Invited: Reverse engineering whole-genome networks | 0 | 0.34 | 2012 |
An algorithmic view on multi-related-segments: a unifying model for approximate common interval | 0 | 0.34 | 2012 |
Workshop: Taxonomic clustering of large-scale metagnomic data | 0 | 0.34 | 2012 |