Title
An SVM-based method for assessment of transcription factor-DNA complex models.
Abstract
A learning-based SVM scoring model with structural features for specific protein-DNA binding and an atomic-level protein-DNA interaction potential DDNA3 significantly improves prediction accuracy of complex models by successfully identifying cases without near-native structural models.
Year
DOI
Venue
2018
10.1186/s12859-018-2538-y
BMC Bioinformatics
Keywords
Field
DocType
Knowledge-based potential,Protein-DNA binding,Rigid docking,Support vector machine,Transcription factor
Biology,Docking (dog),Support vector machine,DNA-binding protein,DNA,Computational biology,Binding selectivity,Genetics,Transcription factor,DNA microarray
Journal
Volume
Issue
ISSN
19
Suppl 20
1471-2105
Citations 
PageRank 
References 
0
0.34
7
Authors
4
Name
Order
Citations
PageRank
Rosario I Corona151.87
Sanjana Sudarshan200.34
Aluru, Srinivas31166122.83
Juntao Guo4155.49