| Graph-Based Information Diffusion Method for Prioritizing Functionally Related Genes in Protein-Protein Interaction Networks. | 0 | 0.34 | 2020 |
| An Evolutionary Trace method defines functionally important bases and sites common to RNA families. | 0 | 0.34 | 2020 |
| Human Kinases Display Mutational Hotspots at Cognate Positions Within Cancer. | 0 | 0.34 | 2017 |
| Discovery of Functional and Disease Pathways by Community Detection in Protein-Protein Interaction Networks. | 1 | 0.35 | 2017 |
| UET: a database of evolutionarily-predicted functional determinants of protein sequences that cluster as functional sites in protein structures | 3 | 0.40 | 2016 |
| Automated hypothesis generation based on mining scientific literature. | 13 | 0.85 | 2014 |
| Function prediction from networks of local evolutionary similarity in protein structure. | 5 | 0.34 | 2013 |
| Accounting for epistatic interactions improves the functional analysis of protein structures. | 2 | 0.38 | 2013 |
| ETAscape: analyzing protein networks to predict enzymatic function and substrates in Cytoscape. | 1 | 0.38 | 2012 |
| PyETV: a PyMOL evolutionary trace viewer to analyze functional site predictions in protein complexes. | 4 | 0.46 | 2010 |
| Evolutionary Trace Annotation Server: automated enzyme function prediction in protein structures using 3D templates. | 7 | 0.55 | 2009 |
| Prediction of enzyme function based on 3D templates of evolutionarily important amino acids. | 48 | 1.13 | 2008 |
| Cavity Scaling: Automated Refinement of Cavity-Aware motifs in protein Function Prediction. | 8 | 0.58 | 2007 |
| The MASH Pipeline for Protein Function Prediction and an Algorithm for the Geometric Refinement of 3D Motifs | 9 | 0.62 | 2007 |
| Background frequencies for residue variability estimates: BLOSUM revisited. | 15 | 0.39 | 2007 |
| Graph-Based Protein Functional Classification | 0 | 0.34 | 2007 |
| Graph sharpening plus graph integration: a synergy that improves protein functional classification. | 16 | 0.88 | 2007 |
| ET viewer: an application for predicting and visualizing functional sites in protein structures | 14 | 1.26 | 2006 |
| Geometric sieving: automated distributed optimization of 3D motifs for protein function prediction | 8 | 0.59 | 2006 |
| PROTEAN: Deriving Protein Structure from Constraints | 28 | 8.16 | 1986 |
