Radka Svobodová Vareková

Author Info

Name	Affiliation	Papers
RADKA SVOBODOVÁ VAREKOVÁ	National Centre for Biomolecular Research,Masaryk University,Brno,Czech Republic	30
Collaborators	Citations	PageRank
63	79	12.54
Referers	Referees	References
229	642	181

Search Limit

100642

Publications (30 rows)

Collaborators (63 rows)

Referers (100 rows)

Referees (100 rows)

Title	Citations	PageRank	Year
Cath: Increased Structural Coverage Of Functional Space	0	0.34	2021
2DProts: database of family-wide protein secondary structure diagrams	0	0.34	2021
BinaryCIF and CIFTools-Lightweight, efficient and extensible macromolecular data management.	0	0.34	2020
ValTrendsDB: bringing Protein Data Bank validation information closer to the user.	0	0.34	2019
ChannelsDB: database of biomacromolecular tunnels and pores.	2	0.37	2018
Moleonline: A Web-Based Tool For Analyzing Channels, Tunnels And Pores (2018 Update)	2	0.41	2018
NEEMP: software for validation, accurate calculation and fast parameterization of EEM charges.	0	0.34	2016
PatternQuery: web application for fast detection of biomacromolecular structural patterns in the entire Protein Data Bank	3	0.39	2015
High-quality and universal empirical atomic charges for chemoinformatics applications.	1	0.36	2015
AtomicChargeCalculator: interactive web-based calculation of atomic charges in large biomolecular complexes and drug-like molecules.	1	0.35	2015
ValidatorDB: database of up-to-date validation results for ligands and non-standard residues from the Protein Data Bank.	3	0.39	2015
How Does the Methodology of 3D Structure Preparation Influence the Quality of pKa Prediction?	3	0.39	2015
Consistency of sugar structures and their annotation in the PDB.	0	0.34	2014
MotiveValidator: interactive web-based validation of ligand and residue structure in biomolecular complexes.	2	0.39	2014
QM quality atomic charges for proteins.	0	0.34	2014
Empirical charges for chemoinformatics applications.	0	0.34	2014
Anatomy of enzyme channels.	9	0.47	2014
Rapid Calculation of Accurate Atomic Charges for Proteins via the Electronegativity Equalization Method.	3	0.52	2013
Predicting pKa values from EEM atomic charges.	0	0.34	2013
MOLE 2.0: advanced approach for analysis of biomacromolecular channels.	23	0.91	2013
SiteBinder: An Improved Approach for Comparing Multiple Protein Structural Motifs.	4	0.53	2012
How the methodology of 3D structure preparation influences the quality of QSPR models?	0	0.34	2012
QSPR designer - employ your own descriptors in the automated QSAR modeling process.	0	0.34	2012
Charge profile analysis reveals that activation of pro-apoptotic regulators Bax and Bak relies on charge transfer mediated allosteric regulation.	2	0.65	2012
Moleonline 2.0: Interactive Web-Based Analysis Of Biomacromolecular Channels	15	0.87	2012
Searching for tunnels of proteins - comparison of approaches and available software tools.	0	0.34	2012
SiteBinder - an improved approach for comparing multiple protein structural motifs. Case studies on biologically important motifs.	1	0.35	2012
QSPR designer - a program to design and evaluate QSPR models. Case study on pKa prediction.	1	0.37	2011
Predicting pK(a) Values of Substituted Phenols from Atomic Charges: Comparison of Different Quantum Mechanical Methods and Charge Distribution Schemes	0	0.34	2011
Software news and updates electronegativity equalization method: Parameterization and validation for organic molecules using the Merz-Kollman-Singh charge distribution scheme	4	0.44	2009