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ROB PATRO
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Name
Affiliation
Papers
ROB PATRO
Univ Maryland, Inst Adv Comp Studies, Ctr Bioinformat & Computat Biol, College Pk, MD 20742 USA
30
Collaborators
Citations
PageRank
65
111
12.98
Referers
Referees
References
329
582
200
Search Limit
100
582
Publications (30 rows)
Collaborators (65 rows)
Referers (100 rows)
Referees (100 rows)
Title
Citations
PageRank
Year
Preprocessing Choices Affect Rna Velocity Results For Droplet Scrna-Seq Data
0
0.34
2021
Compression Of Quantification Uncertainty For Scrna-Seq Counts
0
0.34
2021
Cuttlefish: Fast, Parallel And Low-Memory Compaction Of De Bruijn Graphs From Large-Scale Genome Collections
0
0.34
2021
Terminus enables the discovery of data-driven, robust transcript groups from RNA-seq data.
0
0.34
2020
Tximeta: Reference sequence checksums for provenance identification in RNA-seq.
0
0.34
2020
A Bayesian framework for inter-cellular information sharing improves dscRNA-seq quantification.
1
0.36
2020
An Efficient, Scalable, and Exact Representation of High-Dimensional Color Information Enabled Using de Bruijn Graph Search.
1
0.36
2020
Minnow: a principled framework for rapid simulation of dscRNA-seq data at the read level.
0
0.34
2019
An Efficient, Scalable and Exact Representation of High-Dimensional Color Information Enabled via de Bruijn Graph Search.
0
0.34
2019
Towards Selective-Alignment: Bridging the Accuracy Gap between Alignment-Based and Alignment-Free Transcript Quantification.
0
0.34
2018
Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index.
2
0.40
2018
Grouper: graph-based clustering and annotation for improved de novo transcriptome analysis.
0
0.34
2018
A space and time-efficient index for the compacted colored de Bruijn graph.
0
0.34
2018
Squeakr: an exact and approximate k-mer counting system.
4
0.43
2018
Quark enables semi-reference-based compression of RNA-seq data.
1
0.36
2017
Rainbowfish: A Succinct Colored de Bruijn Graph Representation.
2
0.39
2017
deBGR: an efficient and near-exact representation of the weighted de Bruijn graph.
4
0.40
2017
A General-Purpose Counting Filter: Making Every Bit Count.
14
0.58
2017
Improved data-driven likelihood factorizations for transcript abundance estimation.
2
0.39
2017
Rich Chromatin Structure Prediction from Hi-C Data
1
0.40
2017
RapMap: a rapid, sensitive and accurate tool for mapping RNA-seq reads to transcriptomes.
5
0.50
2016
A computational method for designing diverse linear epitopes including citrullinated peptides with desired binding affinities to intravenous immunoglobulin.
0
0.34
2016
Efficient Index Maintenance Under Dynamic Genome Modification.
0
0.34
2016
Accurate, Fast and Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes.
0
0.34
2016
Optimizing Read Reversals for Sequence Compression - (Extended Abstract).
0
0.34
2015
Topological properties of chromosome conformation graphs reflect spatial proximities within chromatin
2
0.50
2013
Global network alignment using multiscale spectral signatures.
61
1.70
2012
Speeding Up Particle Trajectory Simulations Under Moving Force Fields using Graphic Processing Units
1
0.39
2012
Resolving spatial inconsistencies in chromosome conformation data
2
0.47
2012
Parsimonious reconstruction of network evolution
8
0.62
2011
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