| pGraph: Efficient Parallel Construction of Large-Scale Protein Sequence Homology Graphs | 18 | 0.95 | 2012 |
| Proteotyping of microbial communities by optimization of tandem mass spectrometry data interpretation. | 0 | 0.34 | 2012 |
| MapReduce implementation of a hybrid spectral library-database search method for large-scale peptide identification. | 12 | 0.79 | 2011 |
| Applications in Data-Intensive Computing | 0 | 0.34 | 2010 |
| A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics | 7 | 0.77 | 2010 |
| A Scalable Parallel Algorithm for Large-Scale Protein Sequence Homology Detection | 0 | 0.34 | 2010 |
| An analysis pipeline for the inference of protein-protein interaction networks | 3 | 0.44 | 2009 |
| A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data | 2 | 0.65 | 2009 |
| Statistically appraising process quality of affinity isolation experiments | 1 | 0.35 | 2009 |
| SEBINI-CABIN: An Analysis Pipeline for Biological Network Inference, with a Case Study in Protein-Protein Interaction Network Reconstruction | 1 | 0.42 | 2007 |
| Support Vector Machine Classification of Probability Models and Peptide Features for Improved Peptide Identification from Shotgun Proteomics | 1 | 0.38 | 2007 |
| Current trends in computational inference from mass spectrometry-based proteomics. | 4 | 0.54 | 2007 |
| Analytics challenge - High-throughput visual analytics biological sciences: turning data into knowledge | 0 | 0.34 | 2006 |
| Session Introduction | 0 | 0.34 | 2006 |
| Peptide Identification Via Constrained Multi-Objective Optimization: Pareto-Based Genetic Algorithms | 2 | 1.29 | 2005 |
| Constrained De Novo Peptide Identification via Multi-Objective Optimization | 5 | 0.52 | 2004 |
| De Novo Analysis of Tandem Mass Spectrometry Data as a Non-Deterministic Optimization Problem | 0 | 0.34 | 2004 |
| Sequence optimization as an alternative to de novo analysis of tandem mass spectrometry data. | 9 | 0.89 | 2004 |
| A model of random sequences for de novo peptide sequencing | 4 | 0.66 | 2003 |
