Paper Info
Title
FootPrinter: A program designed for phylogenetic footprinting.
Abstract
Phylogenetic footprinting is a method for the discovery of regulatory elements in a set of homologous regulatory regions, usually collected from multiple species. It does so by identifying the best conserved motifs in those homologous regions. This note describes web software that has been designed specifically for this purpose, making use of the phylogenetic relationships among the homologous sequences in order to make more accurate predictions. The software is called FootPrinter and is available at http://bio.cs.washington.edu/software.html.
Year
DOI
Venue
2003
10.1093/nar/gkg606
NUCLEIC ACIDS RESEARCH
Keywords
Field
DocType
internet,phylogeny,conserved sequence,program design,algorithms
Conserved sequence,Phylogenetic tree,Phylogenetic footprinting,Biology,Homologous Sequences,Genetics,Phylogenetics,Molecular biology,Regulatory sequence
Journal
Volume
Issue
ISSN
31
13.0
0305-1048
Citations 
PageRank 
References 
36
1.73
2
Authors
2
Name
Order
Citations
PageRank
Mathieu Blanchette163162.65
Martin Tompa21103149.69