Paper Info
Title
Model-Based Prediction of the 3D Trajectory of Huge DNA Sequences Interactive Visualization and Exploration
Abstract
A general approach for the three-dimensional representation and visualization of DNA molecule is proposed. This approach is based on a biological 3D model that predicts the complex spatial trajectory of huge naked DNA. This approach makes it possible to have a global point of view of the sequence, in opposition to the textual representation. This brings a new vision and an original approach suitable to launch new bioinformatics studies for the analysis of the spatial architecture of the genome. Besides, in order to obtain a friendly interactive visualization, a dedicated modeling is presented with various graphical representations in order to adapt the visualization to different analysis scales. The paper describes spatial architecture modeling, with consideration of both biological and computational constraints. This work is implemented through a powerful graphic software tool, named ADN-Viewer. Several examples of visualization are shown for various organisms and biological elements.
Year
Venue
Keywords
2001
BIBE
spatial architecture,dedicated modeling,model-based prediction,friendly interactive visualization,original approach,complex spatial trajectory,general approach,different analysis scale,biological element,huge dna sequences interactive,dna molecule,spatial architecture modeling,dna sequence,interactive visualization
Field
DocType
ISBN
Architecture,Biological data visualization,Information visualization,Computer science,Visualization,Visual analytics,Interactive visualization,Artificial intelligence,Graphics software,Bioinformatics,Machine learning,Trajectory
Conference
0-7695-1423-5
Citations 
PageRank 
References 
2
0.44
0
Authors
2
Name
Order
Citations
PageRank
Joan Hérisson1376.62
Rachid Gherbi26316.74