Paper Info
Title
PubDNA Finder: a web database linking full-text articles to sequences of nucleic acids.
Abstract
PubDNA Finder is an online repository that we have created to link PubMed Central manuscripts to the sequences of nucleic acids appearing in them. It extends the search capabilities provided by PubMed Central by enabling researchers to perform advanced searches involving sequences of nucleic acids. This includes, among other features (i) searching for papers mentioning one or more specific sequences of nucleic acids and (ii) retrieving the genetic sequences appearing in different articles. These additional query capabilities are provided by a searchable index that we created by using the full text of the 176 672 papers available at PubMed Central at the time of writing and the sequences of nucleic acids appearing in them. To automatically extract the genetic sequences occurring in each paper, we used an original method we have developed. The database is updated monthly by automatically connecting to the PubMed Central FTP site to retrieve and index new manuscripts. Users can query the database via the web interface provided.
Year
DOI
Venue
2010
10.1093/bioinformatics/btq520
BIOINFORMATICS
Keywords
DocType
Volume
nucleic acid
Journal
26
Issue
ISSN
Citations 
21
1367-4803
2
PageRank 
References 
Authors
0.43
0
9
Name
Order
Citations
PageRank
Miguel García-Remesal112813.75
Alejandro Cuevas2130.86
david perezrey313520.28
Luis Martín4424.60
Alberto Anguita5829.29
Diana de la Iglesia6283.28
Guillermo de la Calle7365.83
José Crespo812624.90
Victor Maojo933353.22