Title
TRAMPLE: the transmembrane protein labelling environment.
Abstract
TRAMPLE (http://gpcr.biocomp.unibo.it/biodec/) is a web application server dedicated to the detection and the annotation of transmembrane protein sequences. TRAMPLE includes different state-of-the-art algorithms for the prediction of signal peptides, transmembrane segments ( both beta-strands and alpha-helices), secondary structure and fast fold recognition. TRAMPLE also includes a complete content management system to manage the results of the predictions. Each user of the server has his/ her own workplace, where the data can be stored, organized, accessed and annotated with documents through a simple web-based interface. In this manner, TRAMPLE significantly improves usability with respect to other more traditional web servers.
Year
DOI
Venue
2005
10.1093/nar/gki440
NUCLEIC ACIDS RESEARCH
Keywords
Field
DocType
web application server,nucleic,fold recognition,secondary structure,protein folding,database management systems,algorithms,internet,transmembrane protein,computer security,membrane proteins
Annotation,Biology,Threading (protein sequence),Usability,Computer network,Transmembrane protein,Bioinformatics,Genetics,Content management system,Web server,Application server,The Internet
Journal
Volume
Issue
ISSN
33
SUPnan
0305-1048
Citations 
PageRank 
References 
3
0.40
5
Authors
7
Name
Order
Citations
PageRank
Piero Fariselli185196.03
Michele Finelli2566.69
Ivan Rossi31307.85
Mauro Amico491.65
Andrea Zauli5454.18
Pier Luigi Martelli637529.49
Rita Casadio71032108.10