Title
BOWiki - a collaborative annotation and ontology curation framework
Abstract
As the amount of data being generated in biology has increased, a major challenge has been how to store and represent this data in a way that makes it easily accessible to researchers from diverse domains. Understanding the relationship between genotype and phenotype is a major focus of biological research. Various approaches to providing the link between genes and their functions have been undertaken - most require significant and dedicated manual curation. Advances in web technologies make possible an alternative route for the construction of such knowledge bases - large-scale community collaboration. We describe here a system, the BOWiki, for the collaborative annotation of gene information. We argue that a semantic wiki provides the functionality required for this project since this can capitalize on the existing representations in biological ontologies. We describe our implementation and show how formal ontologies could be used to increase the usability of the software through type-checking and automatic reasoning.
Year
Venue
Keywords
2007
CKC
semantic wiki,ontology curation,knowledge base
Field
DocType
Citations 
Ontology (information science),Ontology,World Wide Web,Annotation,Biological Ontologies,Computer science,Usability,Data curation,Software,Semantic wiki
Conference
8
PageRank 
References 
Authors
0.73
5
7
Name
Order
Citations
PageRank
Michael Backhaus11157.23
Janet Kelso2303.07
Joshua Bacher3351.75
Heinrich Herre452759.57
Robert Hoehndorf566753.18
Frank Loebe623717.93
Johann Visagie7684.54