Title
Centralization: a new method for the normalization of gene expression data.
Abstract
Microarrays measure values that are approximately proportional to the numbers of copies of different mRNA molecules in samples. Due to technical difficulties, the constant of proportionality between the measured intensities and the numbers of mRNA copies per cell is unknown and may vary for different arrays. Usually, the data are normalized (i.e., array-wise multiplied by appropriate factors) in order to compensate for this effect and to enable informative comparisons between different experiments. Centralization is a new two-step method for the computation of such normalization factors that is both biologically better motivated and more robust than standard approaches. First, for each pair of arrays the quotient of the constants of proportionality is estimated. Second, from the resulting matrix of pairwise quotients an optimally consistent scaling of the samples is computed.
Year
Venue
Field
2001
ISMB (Supplement of Bioinformatics)
Data mining,Normalization (statistics),Computer science,Gene expression
DocType
Volume
ISSN
Conference
17 Suppl 1
1367-4803
Citations 
PageRank 
References 
25
10.71
3
Authors
4
Name
Order
Citations
PageRank
Alexander Zien11255146.93
T Aigner22510.71
R Zimmer38236.53
Thomas Lengauer43155605.03