Title
GFO-Bio: A biological core ontology
Abstract
The rapid increase in the number and use of biological ontologies necessitates developing systems for their integration. In this paper we present a core ontology for biology, and outline its application for integrating biological domain ontologies. Our ontology rests on a foundational ontology, which offers higher-order categories and a theory of levels of reality. The core ontology is implemented in two separate components, each of which adheres to OWL-DL. These can be used independently with efficient DL reasoners, but they will be most effective when used together, which necessitates working with an OWL-Full ontology. The ontology is freely available from our website at: http://bioonto.de/pmwiki.php/Main/GFO-Bio.
Year
DOI
Venue
2008
10.3233/AO-2008-0055
Applied Ontology
Keywords
Field
DocType
biological ontologies necessitates,biomedical ontology,general formal ontology,separate component,ontology integration,owl-full ontology,foundational ontology,levels of reality,biological domain ontology,rapid increase,core ontology,categories,biological core ontology,higher-order category,default knowledge,efficient dl reasoner,higher order
Ontology (information science),Ontology-based data integration,Data mining,General formal ontology,Information retrieval,Core ontology,Process ontology,Open Biomedical Ontologies,Computer science,Knowledge management,Suggested Upper Merged Ontology,Upper ontology
Journal
Volume
Issue
ISSN
3
4
1570-5838
Citations 
PageRank 
References 
19
1.27
5
Authors
5
Name
Order
Citations
PageRank
Robert Hoehndorf166753.18
Frank Loebe223717.93
Roberto Poli3191.27
Heinrich Herre452759.57
Janet Kelso5303.07