Title
DrML: probabilistic modeling of gene duplications.
Abstract
DrML is a software program for inferring evolutionary scenarios from a gene tree and a species tree with speciation time estimates that is based on a general maximum likelihood model. The program implements novel algorithms that efficiently infer most likely scenarios of gene duplication and loss events. Our comparative studies suggest that the general maximum likelihood model provides more credible estimates than standard parsimony reconciliation, especially when speciation times differ significantly. DrML is an open source project written in Python, and along with an on-line manual and sample data sets publicly available.
Year
DOI
Venue
2014
10.1089/cmb.2013.0078
JOURNAL OF COMPUTATIONAL BIOLOGY
Keywords
DocType
Volume
reconciliation,gene tree,species tree,evolutionary scenario,gene duplication
Journal
21.0
Issue
ISSN
Citations 
1
1066-5277
1
PageRank 
References 
Authors
0.36
19
2
Name
Order
Citations
PageRank
Pawel Górecki111214.26
Oliver Eulenstein250552.71