Name
Abstract | ||
|---|---|---|
Protein-protein interactions (PPIs) are mediated through specific regions on proteins. Some proteins have two or more protein interacting regions (IRs) and some IRs are competitively used for interactions with different proteins. IRView currently contains data for 3417 IRs in human and mouse proteins. The data were obtained from different sources and combined with annotated region data from InterPro. Information on non-synonymous single nucleotide polymorphism sites and variable regions owing to alternative mRNA splicing is also included. The IRView web interface displays all IR data, including user-uploaded data, on reference sequences so that the positional relationship between IRs can be easily understood. IRView should be useful for analyzing underlying relationships between the proteins behind the PPI networks. |
Year | DOI | Venue |
|---|---|---|
2012 | 10.1093/bioinformatics/bts289 | BIOINFORMATICS |
Keywords | Field | DocType |
internet,alternative splicing,proteins | Biology,Alternative splicing,RNA splicing,Single-nucleotide polymorphism,Bioinformatics,InterPro | Journal |
Volume | Issue | ISSN |
28 | 14 | 1367-4803 |
Citations | PageRank | References |
2 | 0.35 | 7 |
Authors | ||
10 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Shigeo Fujimori | 1 | 13 | 0.92 |
| Naoya Hirai | 2 | 2 | 0.68 |
| Kazuyo Masuoka | 3 | 2 | 0.35 |
| Tomohiro Oshikubo | 4 | 2 | 0.35 |
| Tatsuhiro Yamashita | 5 | 2 | 0.35 |
| Takanori Washio | 6 | 6 | 1.29 |
| Ayumu Saito | 7 | 107 | 7.23 |
| Masao Nagasaki | 8 | 368 | 26.22 |
| Satoru Miyano | 9 | 2406 | 250.71 |
| Etsuko Miyamoto-Sato | 10 | 13 | 0.92 |