Title
BicOverlapper 2.0: visual analysis for gene expression.
Abstract
Motivation: Systems biology demands the use of several point of views to get a more comprehensive understanding of biological problems. This usually leads to take into account different data regarding the problem at hand, but it also has to do with using different perspectives of the same data. This multifaceted aspect of systems biology often requires the use of several tools, and it is often hard to get a seamless integration of all of them, which would help the analyst to have an interactive discourse with the data. Results: Focusing on expression profiling, BicOverlapper 2.0 visualizes the most relevant aspects of the analysis, including expression data, profiling analysis results and functional annotation. It also integrates several state-of-the-art numerical methods, such as differential expression analysis, gene set enrichment or biclustering.
Year
DOI
Venue
2014
10.1093/bioinformatics/btu120
BIOINFORMATICS
Keywords
Field
DocType
computer graphics,systems biology,gene expression profiling
Data mining,Differential expression,Annotation,Computer science,Profiling (computer programming),Systems biology,Software,Biclustering,Bioinformatics,Computer graphics,Gene expression profiling
Journal
Volume
Issue
ISSN
30
12
1367-4803
Citations 
PageRank 
References 
12
0.49
6
Authors
3
Name
Order
Citations
PageRank
Rodrigo Santamaría11148.98
Roberto Therón240460.72
Luis Quintales3804.27