Title
CAVER: Algorithms for Analyzing Dynamics of Tunnels in Macromolecules.
Abstract
The biological function of a macromolecule often requires that a small molecule or ion is transported through its structure. The transport pathway often leads through void spaces in the structure. The properties of transport pathways change significantly in time; therefore, the analysis of a trajectory from molecular dynamics rather than of a single static structure is needed for understanding the...
Year
DOI
Venue
2016
10.1109/TCBB.2015.2459680
IEEE/ACM Transactions on Computational Biology and Bioinformatics
Keywords
Field
DocType
Atomic measurements,Approximation methods,Joining processes,Heuristic algorithms,Periodic structures,Algorithm design and analysis
Algorithm design,Computer science,Algorithm,Molecular dynamics,Transport Pathway,Voronoi diagram,Bioinformatics,Cluster analysis,Trajectory,Protein structure,Delaunay triangulation
Journal
Volume
Issue
ISSN
13
3
1545-5963
Citations 
PageRank 
References 
3
0.36
16
Authors
6
Name
Order
Citations
PageRank
Antonin Pavelka1714.13
Eva Sebestova2241.57
Barbora Kozlikova312218.59
Jan Brezovsky4826.54
Jiri Sochor511911.85
J Damborský617718.54