Name
Abstract | ||
|---|---|---|
Motivation: While large amounts of epigenomic data are publicly available, their retrieval in a form suitable for downstream analysis is a bottleneck in current research. The DeepBlue Epigenomic Data Server provides a powerful interface and API for filtering, transforming, aggregating and downloading data from several epigenomic consortia. Results: To make public epigenomic data conveniently available for analysis in R, we developed an R/ Bioconductor package that connects to the DeepBlue Epigenomic Data Server, enabling users to quickly gather and transform epigenomic data from selected experiments for analysis in the Bioconductor ecosystem. |
Year | DOI | Venue |
|---|---|---|
2017 | 10.1093/bioinformatics/btx099 | BIOINFORMATICS |
Field | DocType | Volume |
Bottleneck,ENCODE,Data mining,Computer science,Epigenomics,Upload,Bioconductor,Software,Bioinformatics,Database server | Journal | 33 |
Issue | ISSN | Citations |
13 | 1367-4803 | 0 |
PageRank | References | Authors |
0.34 | 2 | 4 |
Name | Order | Citations | PageRank |
|---|---|---|---|
| Felipe Albrecht | 1 | 12 | 1.50 |
| Markus List | 2 | 18 | 6.77 |
| Christoph Bock | 3 | 90 | 12.12 |
| Thomas Lengauer | 4 | 3155 | 605.03 |