Title
Sequence-based prediction of physicochemical interactions at protein functional sites using a function-and-interaction-annotated domain profile database.
Abstract
Our results show that, in addition to the PFSs, the physical interactions at these sites are also conserved in the evolution of proteins. This work provides a valuable sequence-based tool for rational drug design and side-effect assessment. The method is freely available and can be accessed at http://202.119.249.49 .
Year
DOI
Venue
2018
10.1186/s12859-018-2206-2
BMC Bioinformatics
Keywords
Field
DocType
Domain profile module,Hidden Markov model,Physicochemical interaction prediction,Protein functional site prediction,fiDPD
Protein domain,Matthews correlation coefficient,Drug design,Biology,Biochemical reactions,Protein Data Bank,Hidden Markov model,Database,DNA microarray
Journal
Volume
Issue
ISSN
19
1
1471-2105
Citations 
PageRank 
References 
0
0.34
27
Authors
4
Name
Order
Citations
PageRank
Min Han176168.01
Yifan Song200.68
Jiaqiang Qian310.69
Dengming Ming400.34