Paper Info
Title
Iprox: An Integrated Proteome Resource
Abstract
Sharing of research data in public repositories has become best practice in academia. With the accumulation of massive data, network bandwidth and storage requirements are rapidly increasing. The ProteomeXchange (PX) consortium implements a mode of centralized metadata and distributed raw data management, which promotes effective data sharing. To facilitate open access of proteome data worldwide, we have developed the integrated proteome resource iProX (http://www.iprox.org) as a public platform for collecting and sharing raw data, analysis results and metadata obtained from proteomics experiments. The iProX repository employs a web-based proteome data submission process and open sharing of mass spectrometry-based proteomics datasets. Also, it deploys extensive controlled vocabularies and ontologies to annotate proteomics datasets. Users can use a GUI to provide and access data through a fast Aspera-based transfer tool. iProX is a full member of the PX consortium; all released datasets are freely accessible to the public. iProX is based on a high availability architecture and has been deployed as part of the proteomics infrastructure of China, ensuring long-term and stable resource support. iProX will facilitate worldwide data analysis and sharing of proteomics experiments.
Year
DOI
Venue
2019
10.1093/nar/gky869
NUCLEIC ACIDS RESEARCH
Field
DocType
Volume
Data science,Metadata,Best practice,Biology,Proteomics,Data sharing,Proteome,Genetics,Academia (organization),Data management,The Internet
Journal
47
Issue
ISSN
Citations 
D1
0305-1048
2
PageRank 
References 
Authors
0.37
7
12
Name
Order
Citations
PageRank
Jie Ma1172.93
Tao Chen262.19
Songfeng Wu3121.15
Chunyuan Yang420.37
Mingze Bai520.71
Kunxian Shu620.71
Kenli Li754058.66
guoqing zhang8122.47
Zhong Jin9118665.43
Fuchu He10736.00
Henning Hermjakob112433304.84
Yunping Zhu129011.66