| KNIME workflow for retrieving causal drug and protein interactions, building networks, and performing topological enrichment analysis demonstrated by a DILI case study | 0 | 0.34 | 2022 |
| Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology | 0 | 0.34 | 2022 |
| IntAct App: a Cytoscape application for molecular interaction network visualization and analysis | 0 | 0.34 | 2021 |
| Identifiers.Org: Compact Identifier Services In The Cloud | 0 | 0.34 | 2021 |
| A decoupled, modular and scriptable architecture for tools to curate data platforms | 0 | 0.34 | 2021 |
| The Minimum Information About A Molecular Interaction Causal Statement (Mi2cast) | 0 | 0.34 | 2021 |
| BioModels—15 years of sharing computational models in life science | 1 | 0.35 | 2020 |
| The Proteomexchange Consortium In 2020: Enabling 'Big Data' Approaches In Proteomics | 0 | 0.34 | 2020 |
| The reactome pathway knowledgebase | 2 | 0.36 | 2020 |
| Biomodels Parameters: A Treasure Trove Of Parameter Values From Published Systems Biology Models | 1 | 0.35 | 2020 |
| The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE). | 1 | 0.35 | 2020 |
| PhaSepDB: a database of liquid-liquid phase separation related proteins. | 0 | 0.34 | 2020 |
| The omics discovery REST interface. | 0 | 0.34 | 2020 |
| Reactome and ORCID-fine-grained credit attribution for community curation. | 0 | 0.34 | 2019 |
| Complex Portal 2018: extended content and enhanced visualization tools for macromolecular complexes. | 2 | 0.35 | 2019 |
| Iprox: An Integrated Proteome Resource | 2 | 0.37 | 2019 |
| CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination. | 0 | 0.34 | 2019 |
| Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions. | 6 | 0.75 | 2018 |
| BioModels: expanding horizons to include more modelling approaches and formats. | 3 | 0.38 | 2018 |
| Reactome graph database: Efficient access to complex pathway data. | 4 | 0.38 | 2018 |
| The Reactome pathway Knowledgebase. | 7 | 0.58 | 2018 |
| Reactome diagram viewer: Data structures and strategies to boost performance. | 2 | 0.51 | 2018 |
| A Pipeline For Identifying Endogenous Neuropeptides From Spectral Archives | 0 | 0.34 | 2018 |
| Reactome pathway analysis: a high-performance in-memory approach. | 5 | 0.49 | 2017 |
| Open Targets: A Platform For Therapeutic Target Identification And Validation | 17 | 0.87 | 2017 |
| AAgAtlas 1.0: a human autoantigen database. | 1 | 0.38 | 2017 |
| ComplexViewer: visualization of curated macromolecular complexes. | 3 | 0.42 | 2017 |
| The Proteomexchange Consortium In 2017: Supporting The Cultural Change In Proteomics Public Data Deposition | 10 | 0.73 | 2017 |
| Reactome enhanced pathway visualization. | 1 | 0.37 | 2017 |
| Organizational principles of the Reactome human BioPAX model using graph theory methods. | 0 | 0.34 | 2016 |
| Accurate estimation of isoelectric point of protein and peptide based on amino acid sequences. | 3 | 0.65 | 2016 |
| Gene regulation knowledge commons: community action takes care of DNA binding transcription factors. | 1 | 0.36 | 2016 |
| Merging and scoring molecular interactions utilising existing community standards: tools, use-cases and a case study. | 6 | 0.51 | 2015 |
| The Complex Portal - An Encyclopaedia Of Macromolecular Complexes | 14 | 1.04 | 2015 |
| The Reactome Pathway Knowledgebase | 120 | 4.71 | 2014 |
| The Mintact Project-Intact As A Common Curation Platform For 11 Molecular Interaction Databases | 127 | 3.94 | 2014 |
| BioModels linked dataset. | 8 | 0.52 | 2014 |
| BioJS: an open source JavaScript framework for biological data visualization. | 30 | 1.71 | 2013 |
| The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary. | 9 | 0.78 | 2013 |
| Towards the collaborative curation of the registry underlying Identifiers.org. | 2 | 0.37 | 2013 |
| A New Reference Implementation Of The Psicquic Web Service | 14 | 1.05 | 2013 |
| The Proteomics Identifications (Pride) Database And Associated Tools: Status In 2013 | 33 | 3.26 | 2013 |
| Path2Models: large-scale generation of computational models from biochemical pathway maps. | 27 | 0.77 | 2013 |
| The Apoptosis Gene Ontology Project And The Intact-Apoptosis Dataset: Updating The Conceptual Representation Of Apoptosis | 0 | 0.34 | 2013 |
| Capturing cooperative interactions with the PSI-MI format. | 4 | 0.58 | 2013 |
| iAnn: an event sharing platform for the life sciences. | 3 | 0.52 | 2013 |
| The EBI enzyme portal. | 4 | 0.52 | 2013 |
| The Intact Molecular Interaction Database In 2012 | 229 | 8.80 | 2012 |
| Delivering 'Cool URIs' That Do Not Change. | 0 | 0.34 | 2012 |
| Hydra: a scalable proteomic search engine which utilizes the Hadoop distributed computing framework. | 18 | 0.91 | 2012 |
