Title
Redio: Accelerating Disk-Based Graph Processing by Reducing Disk I/Os
Abstract
Disk-based graph systems store part or all of graph data on external devices like hard drives or SSDs, achieving scalability without excessive hardware. However, massive expensive disk I/Os remain the major performance bottleneck of disk-based graph processing. In this paper, we propose Redio, a new approach to accelerating disk-based graph processing by reducing disk I/Os. First, Redio observes that it is feasible to accommodate all vertex states in main memory and this can eliminate almost all vertex-related disk I/Os. Second, Redio introduces a dynamic selective scheduling scheme to identify inactive edges in each iteration and skip them when and only when such skipping can bring performance benefit. To improve its effectiveness, Redioin corporates a compact edge storage to improve data locality and an indexed bitmap to minimize its memory and computation overheads. We have implemented a single-node prototype for Redio under the edge-centric computation model. Extensive experiments show that Redio consistently outperforms well-known edge-centric disk-based systems in all experiments, delivering an average speedup of <inline-formula xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"><tex-math notation="LaTeX">$4.33\times$</tex-math><alternatives><inline-graphic xlink:href="zhang-ieq1-2875458.gif"/></alternatives></inline-formula> on HDDs and <inline-formula xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"><tex-math notation="LaTeX">$5.33\times$</tex-math><alternatives><inline-graphic xlink:href="zhang-ieq2-2875458.gif"/></alternatives></inline-formula> on SSDs over the fastest among them (i.e., GridGraph). Experimental results also show that Redio delivers an average speedup of <inline-formula xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"><tex-math notation="LaTeX">$3.13\times$</tex-math><alternatives><inline-graphic xlink:href="zhang-ieq3-2875458.gif"/></alternatives></inline-formula> on HDDs and <inline-formula xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"><tex-math notation="LaTeX">$1.28\times$</tex-math><alternatives><inline-graphic xlink:href="zhang-ieq4-2875458.gif"/></alternatives></inline-formula> on SSDs over the fastest among representative vertex-centric disk-based systems (i.e., FlashGraph).
Year
DOI
Venue
2019
10.1109/TC.2018.2875458
IEEE Transactions on Computers
Keywords
Field
DocType
Computational modeling,Acceleration,Optimization,Hardware,Performance evaluation,Dynamic scheduling,Indexes
Bottleneck,Locality,Scheduling (computing),Computer science,Parallel computing,Bitmap,Dynamic priority scheduling,Computation,Speedup,Scalability
Journal
Volume
Issue
ISSN
68
3
0018-9340
Citations 
PageRank 
References 
0
0.34
0
Authors
5
Name
Order
Citations
PageRank
Wu, Cheng-Wen11843170.44
Guangyan Zhang217116.20
Yang Wang3314.23
Jiang, X.412.07
Weimin Zheng51889182.48