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KNUT REINERT
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Name
Affiliation
Papers
KNUT REINERT
Algorithmische Bioinformatik, Institut für Informatik, Takustr. 9, 14195 Berlin, Germany
86
Collaborators
Citations
PageRank
192
1020
105.87
Referers
Referees
References
2146
1607
781
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100
1000
Publications (86 rows)
Collaborators (100 rows)
Referers (100 rows)
Referees (100 rows)
Title
Citations
PageRank
Year
Needle: a fast and space-efficient prefilter for estimating the quantification of very large collections of expression experiments
0
0.34
2022
Co-Design for Energy Efficient and Fast Genomic Search: Interleaved Bloom Filter on FPGA
0
0.34
2022
The Collaborative Research Center FONDA.
0
0.34
2021
PriSeT: efficient de novo primer discovery
0
0.34
2021
Score: Smart Consensus Of Rna Expression-A Consensus Tool For Detecting Differentially Expressed Genes In Bacteria
0
0.34
2021
GenMap: Ultra-fast Computation of Genome Mappability.
1
0.35
2020
Ranbow: A fast and accurate method for polyploid haplotype reconstruction.
0
0.34
2020
ganon: precise metagenomics classification against large and up-to-date sets of reference sequences.
0
0.34
2020
DREAM-Yara: an exact read mapper for very large databases with short update time.
0
0.34
2018
Generic accelerated sequence alignment in SeqAn using vectorization and multi-threading.
1
0.41
2018
Epr-Dictionaries: A Practical And Fast Data Structure For Constant Time Searches In Unidirectional And Bidirectional Fm Indices
0
0.34
2017
Vaquita: Fast and Accurate Identification of Structural Variation Using Combined Evidence.
0
0.34
2017
Flexbar 3.0 - SIMD and multicore parallelization.
1
0.35
2017
FAMOUS: Fast Approximate string Matching using OptimUm search Schemes.
0
0.34
2017
From the desktop to the grid: scalable bioinformatics via workflow conversion.
5
0.43
2016
Next Generation Sequencing (Dagstuhl Seminar 16351).
0
0.34
2016
Constant-time and space-efficient unidirectional and bidirectional FM-indices using EPR-dictionaries.
1
0.36
2016
CIDANE: Comprehensive Isoform Discovery and Abundance Estimation.
1
0.37
2015
LocalAli: an evolutionary-based local alignment approach to identify functionally conserved modules in multiple networks.
2
0.37
2015
Gustaf: Detecting and correctly classifying SVs in the NGS twilight zone.
8
0.64
2014
NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks.
21
0.70
2014
Journaled string tree-a scalable data structure for analyzing thousands of similar genomes on your laptop.
5
0.47
2014
Fiona: a parallel and automatic strategy for read error correction.
17
0.79
2014
Lambda: the local aligner for massive biological data.
8
0.53
2014
Genome alignment with graph data structures: a comparison.
9
0.45
2014
From the Desktop to the Grid: conversion of KNIME Workflows to gUSE.
1
0.36
2013
The duplication-loss small phylogeny problem: from cherries to trees.
1
0.37
2013
Optimal precursor ion selection for LC-MALDI MS/MS.
6
0.44
2013
Scalable string similarity search/join with approximate seeds and multiple backtracking
1
0.34
2013
PPINGUIN: Peptide Profiling Guided Identification of Proteins improves quantitation of iTRAQ ratios.
5
0.39
2012
Hidden breakpoints in genome alignments
1
0.36
2012
Fast and sensitive read mapping with approximate seeds and multiple backtracking
0
0.34
2012
RazerS 3: faster, fully sensitive read mapping.
15
0.89
2012
Detecting genomic indel variants with exact breakpoints in single- and paired-end sequencing data using SplazerS.
7
0.65
2012
Antilope—A Lagrangian Relaxation Approach to the de novo Peptide Sequencing Problem
5
0.46
2011
Biomarker discovery and redundancy reduction towards classification using a multi-factorial MALDI-TOF MS T2DM mouse model dataset.
8
0.34
2011
STELLAR: fast and exact local alignments.
16
0.57
2011
A novel and well-defined benchmarking method for second generation read mapping.
27
0.99
2011
MicroRazerS: rapid alignment of small RNA reads.
5
0.54
2010
Oops I Did It Again..... Sustainability In Sequence Analysis Via Software Libraries
0
0.34
2010
Statistical quality assessment and outlier detection for liquid chromatography-mass spectrometry experiments.
5
0.47
2009
A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads.
8
0.61
2009
Integer Linear Programming in Computational Biology
3
0.42
2009
Fast Structural Alignment Of Biomolecules Using A Hash Table, N-Grams And String Descriptors
16
0.80
2009
Computational quantification of peptides from LC-MS data.
4
0.52
2008
Robust consensus computation
27
0.38
2008
08101 Abstracts Collection - Computational Proteomics.
0
0.34
2008
OpenMS - an open-source software framework for mass spectrometry.
90
4.76
2008
LC-MSsim--a simulation software for liquid chromatography mass spectrometry data.
38
0.95
2008
Fast and Adaptive Variable Order Markov Chain Construction
9
0.49
2008
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