| ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning | 2 | 0.39 | 2022 |
| Predictprotein - Predicting Protein Structure And Function For 29 Years | 2 | 0.41 | 2021 |
| Mutations in transmembrane proteins: diseases, evolutionary insights, prediction and comparison with globular proteins | 0 | 0.34 | 2021 |
| Validity Of Machine Learning In Biology And Medicine Increased Through Collaborations Across Fields Of Expertise | 0 | 0.34 | 2020 |
| Variant effect predictions capture some aspects of deep mutational scanning experiments. | 0 | 0.34 | 2020 |
| Detailed prediction of protein sub-nuclear localization. | 0 | 0.34 | 2019 |
| Modeling aspects of the language of life through transfer-learning protein sequences. | 6 | 0.45 | 2019 |
| FunFam protein families improve residue level molecular function prediction. | 1 | 0.35 | 2019 |
| Correction to: Detailed prediction of protein sub-nuclear localization | 0 | 0.34 | 2019 |
| <Emphasis Type="Italic">LocText</Emphasis>: relation extraction of protein localizations to assist database curation | 0 | 0.34 | 2018 |
| HFSP: high speed homology-driven function annotation of proteins. | 0 | 0.34 | 2018 |
| nala: text mining natural language mutation mentions. | 4 | 0.40 | 2017 |
| Bioinformatics advances biology and medicine by turning big data troves into knowledge. | 2 | 0.40 | 2017 |
| Predicted Molecular Effects of Sequence Variants Link to System Level of Disease. | 0 | 0.34 | 2016 |
| MSAViewer: interactive JavaScript visualization of multiple sequence alignments. | 1 | 0.37 | 2016 |
| FreeContact: fast and free software for protein contact prediction from residue co-evolution. | 31 | 1.57 | 2014 |
| tagtog: interactive and text-mining-assisted annotation of gene mentions in PLOS full-text articles. | 12 | 0.62 | 2014 |
| Predictprotein-An Open Resource For Online Prediction Of Protein Structural And Functional Features | 12 | 0.86 | 2014 |
| Homology-based inference sets the bar high for protein function prediction. | 18 | 0.66 | 2013 |
| ISCB computational biology Wikipedia competition. | 3 | 0.54 | 2013 |
| Alternative protein-protein interfaces are frequent exceptions. | 4 | 0.43 | 2012 |
| SNPdbe: constructing an nsSNP functional impacts database. | 6 | 0.53 | 2012 |
| Towards big data science in the decade ahead from ten years of InCoB and the 1st ISCB-Asia Joint Conference. | 18 | 0.49 | 2011 |
| Locdb: Experimental Annotations Of Localization For Homo Sapiens And Arabidopsis Thaliana | 9 | 0.53 | 2011 |
| Protein secondary structure appears to be robust under in silico evolution while protein disorder appears not to be. | 4 | 0.42 | 2010 |
| MuD: an interactive web server for the prediction of non-neutral substitutions using protein structural data. | 8 | 0.57 | 2010 |
| Correlating protein function and stability through the analysis of single amino acid substitutions | 6 | 0.53 | 2009 |
| Physical protein-protein interactions predicted from microarrays. | 9 | 0.53 | 2008 |
| Powerful fusion: PSI-BLAST and consensus sequences. | 5 | 0.54 | 2008 |
| MetalDetector: a web server for predicting metal-binding sites and disulfide bridges in proteins from sequence. | 12 | 0.73 | 2008 |
| Comprehensive in silico mutagenesis highlights functionally important residues in proteins. | 8 | 0.75 | 2008 |
| SNAP predicts effect of mutations on protein function. | 19 | 0.88 | 2008 |
| Natively Unstructured Loops Differ From Other Loops | 11 | 0.62 | 2007 |
| Natively unstructured regions in proteins identified from contact predictions. | 19 | 0.94 | 2007 |
| Epitome: Database Of Structure-Inferred Antigenic Epitopes | 11 | 1.94 | 2006 |
| Protein-Protein Interactions More Conserved Within Species Than Across Species | 21 | 1.16 | 2006 |
| Create and assess protein networks through molecular characteristics of individual proteins. | 1 | 0.36 | 2006 |
| Proftmb: A Web Server For Predicting Bacterial Transmembrane Beta Barrel Proteins | 14 | 0.74 | 2006 |
| PROFbval: predict flexible and rigid residues in proteins. | 18 | 0.96 | 2006 |
| EVAcon: a protein contact prediction evaluation service. | 9 | 1.08 | 2005 |
| PROFcon: novel prediction of long-range contacts. | 61 | 3.42 | 2005 |
| Nmpdb: Database Of Nuclear Matrix Proteins | 2 | 0.63 | 2005 |
| The Predictprotein Server | 53 | 5.34 | 2004 |
| LOCnet and LOCtarget: sub-cellular localization for structural genomics targets. | 6 | 0.66 | 2004 |
| Protein names precisely peeled off free text. | 27 | 1.72 | 2004 |
| CHOP: parsing proteins into structural domains. | 10 | 0.88 | 2004 |
| Annotating protein function through lexical analysis | 0 | 0.34 | 2004 |
| NLProt: extracting protein names and sequences from papers. | 15 | 0.76 | 2004 |
| Static benchmarking of membrane helix predictions. | 19 | 1.30 | 2003 |
| Loc3d: Annotate Sub-Cellular Localization For Protein Structures | 8 | 0.84 | 2003 |
