Name
Abstract | ||
|---|---|---|
Motivation: Ever increasing amounts of biological interaction data are being accumulated worldwide, but they are currently not readily accessible to the biologist at a single site. New techniques are required for retrieving, sharing and presenting data spread over the Internet. Results: We introduce the DASMI system for the dynamic exchange, annotation and assessment of molecular interaction data. DASMI is based on the widely used Distributed Annotation System (DAS) and consists of a data exchange specification, web servers for providing the interaction data and clients for data integration and visualization. The decentralized architecture of DASMI affords the online retrieval of the most recent data from distributed sources and databases. DASMI can also be extended easily by adding new data sources and clients. We describe all DASMI components and demonstrate their use for protein and domain interactions. |
Year | DOI | Venue |
|---|---|---|
2009 | 10.1093/bioinformatics/btp142 | BIOINFORMATICS |
Keywords | Field | DocType |
database management systems,computational biology,internet,proteins | Data integration,Data mining,Graph,World Wide Web,Data exchange,Annotation,Visualization,Computer science,Software,Bioinformatics,The Internet,Web server | Journal |
Volume | Issue | ISSN |
25 | 10 | 1367-4803 |
Citations | PageRank | References |
3 | 0.41 | 53 |
Authors | ||
10 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Hagen Blankenburg | 1 | 75 | 7.53 |
| Robert D Finn | 2 | 4179 | 636.56 |
| Andreas Prlic | 3 | 907 | 93.82 |
| Andrew Jenkinson | 4 | 209 | 16.32 |
| Fidel Ramírez | 5 | 139 | 9.50 |
| Dorothea Emig | 6 | 30 | 3.58 |
| Sven-Eric Schelhorn | 7 | 121 | 7.06 |
| Joachim Büch | 8 | 10 | 2.26 |
| Thomas Lengauer | 9 | 3155 | 605.03 |
| Mario Albrecht | 10 | 349 | 24.74 |