Abstract | ||
---|---|---|
XiP (eXtensible integrative Pipeline) is a flexible, editable and modular environment with a user-friendly interface that does not require previous advanced programming skills to run, construct and edit workflows. XiP allows the construction of workflows by linking components written in both R and Java, the analysis of high-throughput data in grid engine systems and also the development of customized pipelines that can be encapsulated in a package and distributed. XiP already comes with several ready-to-use pipeline flows for the most common genomic and transcriptomic analysis and similar to 300 computational components. |
Year | DOI | Venue |
---|---|---|
2013 | 10.1093/bioinformatics/bts630 | BIOINFORMATICS |
Field | DocType | Volume |
Pipeline transport,Computer science,Software,Modular design,Bioinformatics,Extensibility,Java,Workflow,Grid,License | Journal | 29 |
Issue | ISSN | Citations |
1 | 1367-4803 | 1 |
PageRank | References | Authors |
0.35 | 9 | 7 |
Name | Order | Citations | PageRank |
---|---|---|---|
Masao Nagasaki | 1 | 368 | 26.22 |
André Fujita | 2 | 226 | 17.14 |
Yayoi Sekiya | 3 | 2 | 1.06 |
Ayumu Saito | 4 | 107 | 7.23 |
Emi Ikeda | 5 | 28 | 2.62 |
Chen Li | 6 | 90 | 7.16 |
Satoru Miyano | 7 | 2406 | 250.71 |