Name
Papers
Collaborators
EUGENE V. KOONIN
43
75
Citations 
PageRank 
Referers 
986
239.69
3258
Referees 
References 
1042
309
Search Limit
1001000
Title
Citations
PageRank
Year
Cog Database Update: Focus On Microbial Diversity, Model Organisms, And Widespread Pathogens10.362021
Microbial genome analysis: the COG approach.30.402019
ATGC database and ATGC-COGs: an updated resource for micro- and macro-evolutionary studies of prokaryotic genomes and protein family annotation.10.352017
Prokaryotic Virus Orthologous Groups (Pvogs): A Resource For Comparative Genomics And Protein Family Annotation30.422017
A census of α-helical membrane proteins in double-stranded DNA viruses infecting bacteria and archaea.10.402015
Expanded Microbial Genome Coverage And Improved Protein Family Annotation In The Cog Database251.142015
Comparative Genomics Approaches to Identifying Functionally Related Genes.00.342014
The Vast, Conserved Mammalian Lincrnome00.342013
Dependencies among editing sites in serotonin 2C receptor mRNA.00.342012
Universal Pacemaker Of Genome Evolution60.702012
Computational methods for Gene Orthology inference.291.482011
Are There Laws Of Genome Evolution?30.482011
A Detailed History Of Intron-Rich Eukaryotic Ancestors Inferred From A Global Survey Of 100 Complete Genomes10.362011
On The Origin Of Dna Genomes: Evolution Of The Division Of Labor Between Template And Catalyst In Model Replicator Systems20.532011
Predictability Of Evolutionary Trajectories In Fitness Landscapes20.432011
Obituary: Walter Fitch and the orthology paradigm.00.342011
A low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches110.772010
EREM: Parameter Estimation and Ancestral Reconstruction by Expectation-Maximization Algorithm for a Probabilistic Model of Genomic Binary Characters Evolution.10.372010
Atgc: A Database Of Orthologous Genes From Closely Related Prokaryotic Genomes And A Research Platform For Microevolution Of Prokaryotes40.442009
A rigorous analysis of the pattern of intron conservation supports the coelomata clade of animals00.342007
Cyanobacterial response regulator PatA contains a conserved N-terminal domain (PATAN) with an alpha-helical insertion20.432006
Biological applications of the theory of birth-and-death processes111.392006
The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin system in archaea and bacteria00.342006
Analysis of evolution of exon-intron structure of eukaryotic genes130.882005
Modeling genome evolution with a diffusion approximation of a birth-and-death process40.562005
An expectation-maximization algorithm for analysis of evolution of exon-intron structure of eukaryotic genes40.812005
Computational approaches for the analysis of gene neighbourhoods in prokaryotic genomes.120.972004
Simple stochastic birth andz death models of genome evolution: was there enough time for us to evolve?91.792003
The COG database: an updated version includes eukaryotes35452.322003
The Third Georgia Tech-Emory International Conference on Bioinformatics: In Silico Biology; Bioinformatics After Human Genome (November 15-18, 2001, Atlanta, Georgia, USA)00.342001
Presence of ATG triplets in 5' untranslated regions of eukaryotic cDNAs correlates with a 'weak' context of the start codon.142.292001
The Cog Database: New Developments In Phylogenetic Classification Of Proteins From Complete Genomes16370.852001
The Cog Database: A Tool For Genome-Scale Analysis Of Protein Functions And Evolution16462.862000
Winnowing sequences from a database search.10.351999
IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices.7612.391999
Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement, and operon disruption.426.961998
Genome analysis using clusters of orthologous groups (COGs)21.591998
SEALS: A System for Easy Analysis of Lots of Sequences155.311997
A natural taxonomy of gene families from complete genomes00.341997
Prediction Of An Ribosomal-Rna Methyltransferase Domain In Human Tumor-Specific Nucleolar Protein P12000.341994
A simple tool to search for sequence motifs that are conserved in BLAST outputs.75.601994
Conserved Sequence Motifs In The Initiator Proteins For Rolling Circle Dna-Replication Encoded By Diverse Replicons From Eubacteria, Eukaryotes And Archaebacteria00.341992
Comparative Analysis of Biopolymer Sequences: Reflections on the Validity of the Methodology and the Underlying General Principles.00.341992